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Dear All,
I am trying to use ode solver "rk4" to solve an ODE system, however, it keeps saying: Error in eval(expr, envir, enclos) : object "dIN" not found. The sample codes are enclosed as follows, please help me. Thank you very much! rm(list=ls()) library(odesolve) # The ODE system ode <- function(t,x,p){ with(as.list(c(x,p)),{ if(IN==0){ dIN <- 1 switch <- c } else { switch <- 0 } dP1 <- a+b*P1-switch*P1 dP2 <- a-b*P1+switch*P2 list(c(dP1,dP2,dIN)) }) } # Parameters a <- 0.1 b <- 0.2 c <- 0.5 parms <- c(a=a,b=b,c=c) # Initial conditions P10 <- 100.0 P20 <- 0.0 IN0 <- 0.0 xstart <- c(P1=P10,P2=P20,IN=IN0) # Time points times <- seq(0,10,by=1) out <- as.data.frame(rk4(xstart,times,ode,parms)) [[alternative HTML version deleted]] ______________________________________________ [hidden email] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. |
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Error originates in the customized function ode. When IN!=0, You did
not assign a value to dIN which is required in list(c(dP1,dP2,dIN)). On 2010-9-21 2:30, Tianchan Niu wrote: > Dear All, > > > > I am trying to use ode solver "rk4" to solve an ODE system, however, it > keeps saying: Error in eval(expr, envir, enclos) : object "dIN" not found. > The sample codes are enclosed as follows, please help me. Thank you very > much! > > > > rm(list=ls()) > > > > library(odesolve) > > > > # The ODE system > > ode<- function(t,x,p){ > > > > with(as.list(c(x,p)),{ > > > > if(IN==0){ > > dIN<- 1 > > switch<- c > > } > > else { > > switch<- 0 > > } > > > > dP1<- a+b*P1-switch*P1 > > dP2<- a-b*P1+switch*P2 > > > > list(c(dP1,dP2,dIN)) > > }) > > } > > > > # Parameters > > a<- 0.1 > > b<- 0.2 > > c<- 0.5 > > > > parms<- c(a=a,b=b,c=c) > > > > # Initial conditions > > P10<- 100.0 > > P20<- 0.0 > > IN0<- 0.0 > > > > xstart<- c(P1=P10,P2=P20,IN=IN0) > > > > # Time points > > times<- seq(0,10,by=1) > > > > out<- as.data.frame(rk4(xstart,times,ode,parms)) > > > [[alternative HTML version deleted]] > > ______________________________________________ > [hidden email] mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > ______________________________________________ [hidden email] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. |
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