Installing Cardinal Workflows

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Installing Cardinal Workflows

Shadrack Mutuku
I have successfully installed the cardinal package but having issues
installing cardinal workflows.  I am getting the following error message on
my console:

> source("http://bioconductor.org/biocLite.R")
Bioconductor version 3.4 (BiocInstaller 1.24.0), ?biocLite for help
> biocLite("CardinalWorkflows")
BioC_mirror: https://bioconductor.org
Using Bioconductor 3.4 (BiocInstaller 1.24.0), R 3.3.3 (2017-03-06).
Installing package(s) ‘CardinalWorkflows’
installing the source package ‘CardinalWorkflows’

trying URL
'https://bioconductor.org/packages/3.4/data/experiment/src/contrib/CardinalWorkflows_1.6.0.tar.gz'
Content type 'application/x-gzip' length 150031609 bytes (143.1 MB)
downloaded 143.1 MB

'C:\Program' is not recognized as an internal or external command,
operable program or batch file.

The downloaded source packages are in
‘C:\Users\a1708277\AppData\Local\Temp\RtmpIbY3aM\downloaded_packages’
installation path not writeable, unable to update packages: cluster,
lattice,
  survival
Warning messages:
1: running command '"C:/Program Files/R/R-3.3.3/bin/x64/R" CMD INSTALL -l
"\\UOFA\USERS$\users7\a1708277\R\win-library\3.3"
C:\Users\a1708277\AppData\Local\Temp\RtmpIbY3aM/downloaded_packages/CardinalWorkflows_1.6.0.tar.gz'
had status 1
2: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘CardinalWorkflows’ had non-zero exit status
> library(CardinalWorkflows)
Error in library(CardinalWorkflows) :
  there is no package called ‘CardinalWorkflows’

*Please help. Thanks*
______________________________________________
[hidden email] mailing list -- To UNSUBSCRIBE and more, see
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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Re: Installing Cardinal Workflows

jdnewmil-2
See http://bfy.tw/BIkn

For next time I recommend reading the Posting Guide mentioned in the footer of this and every post on this list.
--
Sent from my phone. Please excuse my brevity.

On April 18, 2017 8:18:01 PM PDT, Shadrack Mutuku <[hidden email]> wrote:

>I have successfully installed the cardinal package but having issues
>installing cardinal workflows.  I am getting the following error
>message on
>my console:
>
>> source("http://bioconductor.org/biocLite.R")
>Bioconductor version 3.4 (BiocInstaller 1.24.0), ?biocLite for help
>> biocLite("CardinalWorkflows")
>BioC_mirror: https://bioconductor.org
>Using Bioconductor 3.4 (BiocInstaller 1.24.0), R 3.3.3 (2017-03-06).
>Installing package(s) ‘CardinalWorkflows’
>installing the source package ‘CardinalWorkflows’
>
>trying URL
>'https://bioconductor.org/packages/3.4/data/experiment/src/contrib/CardinalWorkflows_1.6.0.tar.gz'
>Content type 'application/x-gzip' length 150031609 bytes (143.1 MB)
>downloaded 143.1 MB
>
>'C:\Program' is not recognized as an internal or external command,
>operable program or batch file.
>
>The downloaded source packages are in
>‘C:\Users\a1708277\AppData\Local\Temp\RtmpIbY3aM\downloaded_packages’
>installation path not writeable, unable to update packages: cluster,
>lattice,
>  survival
>Warning messages:
>1: running command '"C:/Program Files/R/R-3.3.3/bin/x64/R" CMD INSTALL
>-l
>"\\UOFA\USERS$\users7\a1708277\R\win-library\3.3"
>C:\Users\a1708277\AppData\Local\Temp\RtmpIbY3aM/downloaded_packages/CardinalWorkflows_1.6.0.tar.gz'
>
>had status 1
>2: In install.packages(pkgs = doing, lib = lib, ...) :
>  installation of package ‘CardinalWorkflows’ had non-zero exit status
>> library(CardinalWorkflows)
>Error in library(CardinalWorkflows) :
>  there is no package called ‘CardinalWorkflows’
>
>*Please help. Thanks*
>______________________________________________
>[hidden email] mailing list -- To UNSUBSCRIBE and more, see
>https://stat.ethz.ch/mailman/listinfo/r-help
>PLEASE do read the posting guide
>http://www.R-project.org/posting-guide.html
>and provide commented, minimal, self-contained, reproducible code.

______________________________________________
[hidden email] mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.