hi all,
i want to share an R installation from a master node to several compute nodes via NFS. all nodes run ubuntu 16.04. I tried building R from source but hit a wall several times because of missing dependencies. So I am looking for something that uses the usual apt-get install proceedure, but would place the installation in the non-standard location. For context, right now I would have to share all of *root@master*:*~* whereis R R: /usr/bin/R /usr/lib/R /etc/R /usr/local/lib/R /usr/share/R /usr/share/man/man1/R.1.gz and I would like to install R into a new folder on the master node, say, NFS_share, and share just that. I found that `dpkg` has an option `--root=directory` to specify a non standard install location for a debian package installation. but i'm not even sure how this would work on ubuntu (can i install a debian packge on ubuntu?!) thanks for any help! florian [[alternative HTML version deleted]] ______________________________________________ [hidden email] mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. |
On Wed, Nov 8, 2017 at 6:14 AM, Florian Oswald <[hidden email]> wrote:
> hi all, > > i want to share an R installation from a master node to several compute > nodes via NFS. all nodes run ubuntu 16.04. I tried building R from source > but hit a wall several times because of missing dependencies. apt-get build-dep r-base should take care of that. --Ista So I am > looking for something that uses the usual apt-get install proceedure, but > would place the installation in the non-standard location. For context, > right now I would have to share all of > > *root@master*:*~* whereis R > > R: /usr/bin/R /usr/lib/R /etc/R /usr/local/lib/R /usr/share/R > /usr/share/man/man1/R.1.gz > > and I would like to install R into a new folder on the master node, say, > NFS_share, and share just that. > > I found that `dpkg` has an option `--root=directory` to specify a non > standard install location for a debian package installation. but i'm not > even sure how this would work on ubuntu (can i install a debian packge on > ubuntu?!) > > thanks for any help! > florian > > [[alternative HTML version deleted]] > > ______________________________________________ > [hidden email] mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. ______________________________________________ [hidden email] mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. |
I can install R with
sudo apt-get update sudo apt-get install r-base this is not my problem, and indeed, not my question. my question was how could I share the resulting R installation over NFS? Do I have to export every location where apt-get installs a component or can I force apt-get to place the installation in a certain location? On 8 November 2017 at 17:37, Ista Zahn <[hidden email]> wrote: > On Wed, Nov 8, 2017 at 6:14 AM, Florian Oswald <[hidden email]> > wrote: > > hi all, > > > > i want to share an R installation from a master node to several compute > > nodes via NFS. all nodes run ubuntu 16.04. I tried building R from source > > but hit a wall several times because of missing dependencies. > > apt-get build-dep r-base > > should take care of that. > > --Ista > > So I am > > looking for something that uses the usual apt-get install proceedure, but > > would place the installation in the non-standard location. For context, > > right now I would have to share all of > > > > *root@master*:*~* whereis R > > > > R: /usr/bin/R /usr/lib/R /etc/R /usr/local/lib/R /usr/share/R > > /usr/share/man/man1/R.1.gz > > > > and I would like to install R into a new folder on the master node, say, > > NFS_share, and share just that. > > > > I found that `dpkg` has an option `--root=directory` to specify a non > > standard install location for a debian package installation. but i'm not > > even sure how this would work on ubuntu (can i install a debian packge on > > ubuntu?!) > > > > thanks for any help! > > florian > > > > [[alternative HTML version deleted]] > > > > ______________________________________________ > > [hidden email] mailing list -- To UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide http://www.R-project.org/ > posting-guide.html > > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] ______________________________________________ [hidden email] mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. |
On Nov 9, 2017 5:07 AM, "Florian Oswald" <[hidden email]> wrote:
I can install R with sudo apt-get update sudo apt-get install r-base this is not my problem, and indeed, not my question. my question was how could I share the resulting R installation over NFS? Do I have to export every location where apt-get installs a component or can I force apt-get to place the installation in a certain location? Sounds like a question for an ubuntu forum, or r-sig-debian perhaps. On 8 November 2017 at 17:37, Ista Zahn <[hidden email]> wrote: > On Wed, Nov 8, 2017 at 6:14 AM, Florian Oswald <[hidden email]> > wrote: > > hi all, > > > > i want to share an R installation from a master node to several compute > > nodes via NFS. all nodes run ubuntu 16.04. I tried building R from source > > but hit a wall several times because of missing dependencies. > > apt-get build-dep r-base > > should take care of that. > > --Ista > > So I am > > looking for something that uses the usual apt-get install proceedure, but > > would place the installation in the non-standard location. For context, > > right now I would have to share all of > > > > *root@master*:*~* whereis R > > > > R: /usr/bin/R /usr/lib/R /etc/R /usr/local/lib/R /usr/share/R > > /usr/share/man/man1/R.1.gz > > > > and I would like to install R into a new folder on the master node, say, > > NFS_share, and share just that. > > > > I found that `dpkg` has an option `--root=directory` to specify a non > > standard install location for a debian package installation. but i'm not > > even sure how this would work on ubuntu (can i install a debian packge on > > ubuntu?!) > > > > thanks for any help! > > florian > > > > [[alternative HTML version deleted]] > > > > ______________________________________________ > > [hidden email] mailing list -- To UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide http://www.R-project.org/posti > ng-guide.html > > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] ______________________________________________ [hidden email] mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. |
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