lattice legen and auto.key conflict

[GOUACHE David]

Hello R-helpers,

I'm trying to customize a graphic in lattice using the 'legend' argument to add labels on my plot but in the process I'm losing the legend drawn by 'auto.key', despite the fact that I'm actually not sticking these on the same sides of the graphic. I worked up a quick and simple example with the iris data :

### here's the basic graph
xyplot(Sepal.Length+Sepal.Width~Petal.Length+Petal.Width,data=iris,groups=Species,auto.key=list(space="right"))

### now I try to add a 'legend' argument :
xyplot(Sepal.Length+Sepal.Width~Petal.Length+Petal.Width,data=iris,groups=Species,auto.key=list(space="right"),legend=list(bottom=list(fun=grid.text,args=list(label="youpi !"))))

### and sadly the my initial legend has disappeared...


Any pointers ?
Many thanks in advance for your help

David Gouache
ARVALIS - Institut du Végétal
Service Génétique Physiologie et Protection des Plantes
IBP - Université Paris Sud
Rue de Noetzlin - Bât. 630
91405 - ORSAY CEDEX (Adresse Postale)
91190 - GIF SUR YVETTE (Adresse GPS, livraison)
Tél : [phone]
Port : +33.(0)6.86.08.94.32
Fax : [phone]


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[Bert Gunter]

David:

I think one needs to carefully parse the xyplot help, where it says:

"To use more than one legend, or to have arbitrary legends not
constrained by the structure imposed by key, use the legend argument.
"

So I presume that this is to be interpreted as: "ONLY the legend
argument will be used when both key(including auto.key) and legend
arguments are given." However, this is not clear to me either. The
Help appears to leave the behavior when one tries to use both
unspecified.

-- Bert

On Mon, Jul 30, 2012 at 9:10 AM, GOUACHE David
<[hidden email]> wrote:

> Hello R-helpers,
>
> I'm trying to customize a graphic in lattice using the 'legend' argument to add labels on my plot but in the process I'm losing the legend drawn by 'auto.key', despite the fact that I'm actually not sticking these on the same sides of the graphic. I worked up a quick and simple example with the iris data :
>
> ### here's the basic graph
> xyplot(Sepal.Length+Sepal.Width~Petal.Length+Petal.Width,data=iris,groups=Species,auto.key=list(space="right"))
>
> ### now I try to add a 'legend' argument :
> xyplot(Sepal.Length+Sepal.Width~Petal.Length+Petal.Width,data=iris,groups=Species,auto.key=list(space="right"),legend=list(bottom=list(fun=grid.text,args=list(label="youpi !"))))
>
> ### and sadly the my initial legend has disappeared...
>
>
> Any pointers ?
> Many thanks in advance for your help
>
> David Gouache
> ARVALIS - Institut du Végétal
> Service Génétique Physiologie et Protection des Plantes
> IBP - Université Paris Sud
> Rue de Noetzlin - Bât. 630
> 91405 - ORSAY CEDEX (Adresse Postale)
> 91190 - GIF SUR YVETTE (Adresse GPS, livraison)
> Tél : [phone]
> Port : +33.(0)6.86.08.94.32
> Fax : [phone]
>
>
>         [[alternative HTML version deleted]]
>
>
> ______________________________________________
> [hidden email] mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>

--

Bert Gunter
Genentech Nonclinical Biostatistics

Internal Contact Info:
Phone: [phone]
Website:
http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

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[Deepayan Sarkar]

On Mon, Jul 30, 2012 at 10:16 PM, Bert Gunter <[hidden email]> wrote:

> David:
>
> I think one needs to carefully parse the xyplot help, where it says:
>
> "To use more than one legend, or to have arbitrary legends not
> constrained by the structure imposed by key, use the legend argument.
> "
>
> So I presume that this is to be interpreted as: "ONLY the legend
> argument will be used when both key(including auto.key) and legend
> arguments are given." However, this is not clear to me either. The
> Help appears to leave the behavior when one tries to use both
> unspecified.

The help could indeed use some love.

Note however, that the entry for 'auto.key' (surely relevant here) says that:

          More precisely, if 'auto.key' is not 'FALSE', 'groups' is
          non-null, and there is no 'key' or 'legend' argument
          specified in the call, a key is created with 'simpleKey' with
          'levels(groups)' as the first ('text') argument.

And that condition is not satisfied here.

So that leaves the following two options (use key=, or update). The
documentation is silent about whether or not these should be
successful, but fortunately both seem to work.

xyplot(Sepal.Length+Sepal.Width~Petal.Length+Petal.Width, data=iris,
       groups = Species,
       key = simpleKey(text = levels(iris$Species), space="right"),
       legend=list(bottom=list(fun=grid.text,args=list(label="youpi !"))))

## or

p <- xyplot(Sepal.Length+Sepal.Width~Petal.Length+Petal.Width,
            data=iris, groups=Species, auto.key=list(space="right"))

update(p, legend=list(bottom=list(fun=grid.text,args=list(label="youpi !"))))

(I wish that reading lattice help would be less like trying to follow
an Asimov robot story, but there are too many possible interactions to
document both comprehensively and accurately.)

-Deepayan

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[Peter Ehlers]

On 2012-07-30 23:55, Deepayan Sarkar wrote:

>
> (I wish that reading lattice help would be less like trying to follow
> an Asimov robot story, but there are too many possible interactions to
> document both comprehensively and accurately.)

I, Robot, having assessed said lattice help, determine it to be
admirable in execution. My master agrees.

Peter Ehlers

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