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I'm trying to use phylo.pca function from phytools for the first time. I'm using an ultrametric tree with 167 tips and all branch lengths transformed to 1.
I lunched the pPCA like this:
pPCA<-phyl.pca(tree,data,method = "lambda")
For some reason it takes for ever and never reaches the end of the process. I tried with method="BM" and the process runs normally. Has this happened to anyone here? How can I go around this?
Thanks in advance,
Institut des Sciences de l'Evolution
UMR5554, CNRS, IRD, EPHE
Université de Montpellier
Place Eugène Bataillon
34095 Montpellier Cedex 05
Tel: +33 (4 ) 67 14 46 52
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