CCA report "species environment correlation"

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CCA report "species environment correlation"

SRuhl
Hi everyone,
I did a CCA with R in the vegan package and got all the outputs I need/want to report except for one, that is the "species environment correlation" values. I only know of them because of one of the sources I read up on about CCAs reported it and I have the suspicion that it´s a value reported when you do a CCA in SPSS (which I have never done) and that just doesnßt come up in R.
Can anyone tell me how to find it or calculate it myself? Do I need to run posthoc stats or additional tests on my results?
Thanks in advance!
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Re: CCA report "species environment correlation"

Gavin Simpson
On Fri, 2013-04-12 at 11:00 -0700, SRuhl wrote:

> Hi everyone,
> I did a CCA with R in the vegan package and got all the outputs I need/want
> to report except for one, that is the "species environment correlation"
> values. I only know of them because of one of the sources I read up on about
> CCAs reported it and I have the suspicion that it´s a value reported when
> you do a CCA in SPSS (which I have never done) and that just doesnßt come up
> in R.
> Can anyone tell me how to find it or calculate it myself? Do I need to run
> posthoc stats or additional tests on my results?
> Thanks in advance!

See `?spenvcor` with vegan loaded. Pass it your CCA model object.

G

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Re: CCA report "species environment correlation"

SRuhl
Thank you thank you thank you!
In hindsight this seems so easy I cannot believe I couldn´t find it anywhere,
Thanks :)