Hi, I'm working with custom slides(Cy5) and worki...
I'm working with custom slides(Cy5) and working in the normalization of the arrays.
I have three arrays (technical replicates).
I have sucesfully normalized the data using vsn, however i would like to compare it to the normalization using spike in controls.
My controls are annotated as control-1 to x and i would like to do etiher a normalization by block per array or the mean of all the controls per array.