Vignettes with missing or empty \VignetteIndexEntry:

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Vignettes with missing or empty \VignetteIndexEntry:

Christophe Dutang1
Hi,

I have a problem when checking the package 'probdistr' (on probability  
distributions).
I got this warning

* checking index information ... WARNING
Vignettes with missing or empty \VignetteIndexEntry:
  [1] "probdistr-chi"        "probdistr-contextra"  "probdistr-discrete"
  [4] "probdistr-discrextra" "probdistr-exp"        "probdistr-
finitesupp"
  [7] "probdistr-gaussian"   "probdistr-general"    "probdistr-gumbel"
[10] "probdistr-intro"      "probdistr-logis"      "probdistr-math"
[13] "probdistr-misc"       "probdistr-mult"       "probdistr-pareto"
[16] "probdistr-student"
See the information on INDEX files and package subdirectories in the
chapter 'Creating R packages' of the 'Writing R Extensions' manual.

The warning tells me \VignetteIndexEntry is missing however there is  
one in probdistr-main.Rnw (Sweave file calling all other files via  
\SweaveInput{probdistr-XXXXX}). Let us note this file is not listed in  
the above files...

But the build is ok

* checking for file 'pkg/DESCRIPTION' ... OK
* preparing 'pkg':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package ‘probdistr’ ...
** R
** inst
** help
*** installing help indices
  >>> Building/Updating help pages for package 'probdistr'
      Formats: text html latex example
   codeforplot                       text    html    latex   example
** building package indices ...
* DONE (probdistr)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'probdistr_1.00.tar.gz'

Does someone have an idea about this?

Thanks in advance

Christophe

PS : files are available on R-forge

--
Christophe Dutang
Ph. D. student at ISFA, Lyon, France
website: http://dutangc.free.fr

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Fwd: Vignettes with missing or empty \VignetteIndexEntry:

Christophe Dutang1
I also have another warning while checking the package

* checking package vignettes in 'inst/doc' ... WARNING
Package vignettes without corresponding PDF:
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
chi.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
contextra.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
discrete.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
discrextra.Rnw
   .../These/code/R/probdistr/Rforge/distributions/pkg/inst/doc/
probdistr-exp.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
finitesupp.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
gaussian.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
general.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
gumbel.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
intro.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
logis.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
math.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
misc.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
mult.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
pareto.Rnw
   .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr-
student.Rnw
* checking PDF version of manual ... OK



Début du message réexpédié :

> De : Christophe Dutang <[hidden email]>
> Date : 10 mai 2009 11:52:17 HAEC
> À : [hidden email]
> Objet : Vignettes with missing or empty \VignetteIndexEntry:
>
> Hi,
>
> I have a problem when checking the package 'probdistr' (on  
> probability distributions).
> I got this warning
>
> * checking index information ... WARNING
> Vignettes with missing or empty \VignetteIndexEntry:
> [1] "probdistr-chi"        "probdistr-contextra"  "probdistr-discrete"
> [4] "probdistr-discrextra" "probdistr-exp"        "probdistr-
> finitesupp"
> [7] "probdistr-gaussian"   "probdistr-general"    "probdistr-gumbel"
> [10] "probdistr-intro"      "probdistr-logis"      "probdistr-math"
> [13] "probdistr-misc"       "probdistr-mult"       "probdistr-pareto"
> [16] "probdistr-student"
> See the information on INDEX files and package subdirectories in the
> chapter 'Creating R packages' of the 'Writing R Extensions' manual.
>
> The warning tells me \VignetteIndexEntry is missing however there is  
> one in probdistr-main.Rnw (Sweave file calling all other files via  
> \SweaveInput{probdistr-XXXXX}). Let us note this file is not listed  
> in the above files...
>
> But the build is ok
>
> * checking for file 'pkg/DESCRIPTION' ... OK
> * preparing 'pkg':
> * checking DESCRIPTION meta-information ... OK
> * installing the package to re-build vignettes
> * Installing *source* package ‘probdistr’ ...
> ** R
> ** inst
> ** help
> *** installing help indices
> >>> Building/Updating help pages for package 'probdistr'
>     Formats: text html latex example
>  codeforplot                       text    html    latex   example
> ** building package indices ...
> * DONE (probdistr)
> * creating vignettes ... OK
> * removing junk files
> * checking for LF line-endings in source and make files
> * checking for empty or unneeded directories
> * building 'probdistr_1.00.tar.gz'
>
> Does someone have an idea about this?
>
> Thanks in advance
>
> Christophe
>
> PS : files are available on R-forge
>
> --
> Christophe Dutang
> Ph. D. student at ISFA, Lyon, France
> website: http://dutangc.free.fr
>
>
>
>
--
Christophe Dutang
Ph. D. student at ISFA, Lyon, France
website: http://dutangc.free.fr





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Re: Vignettes with missing or empty \VignetteIndexEntry:

Kurt Hornik-5
In reply to this post by Christophe Dutang1
>>>>> Christophe Dutang writes:

> Hi,
> I have a problem when checking the package 'probdistr' (on probability  
> distributions).
> I got this warning

> * checking index information ... WARNING
> Vignettes with missing or empty \VignetteIndexEntry:
>   [1] "probdistr-chi"        "probdistr-contextra"  "probdistr-discrete"
>   [4] "probdistr-discrextra" "probdistr-exp"        "probdistr-
> finitesupp"
>   [7] "probdistr-gaussian"   "probdistr-general"    "probdistr-gumbel"
> [10] "probdistr-intro"      "probdistr-logis"      "probdistr-math"
> [13] "probdistr-misc"       "probdistr-mult"       "probdistr-pareto"
> [16] "probdistr-student"
> See the information on INDEX files and package subdirectories in the
> chapter 'Creating R packages' of the 'Writing R Extensions' manual.

> The warning tells me \VignetteIndexEntry is missing however there is  
> one in probdistr-main.Rnw (Sweave file calling all other files via  
> \SweaveInput{probdistr-XXXXX}). Let us note this file is not listed in  
> the above files...

> But the build is ok

> * checking for file 'pkg/DESCRIPTION' ... OK
> * preparing 'pkg':
> * checking DESCRIPTION meta-information ... OK
> * installing the package to re-build vignettes
> * Installing *source* package ‘probdistr’ ...
> ** R
> ** inst
> ** help
> *** installing help indices
>>>> Building/Updating help pages for package 'probdistr'
>       Formats: text html latex example
>    codeforplot                       text    html    latex   example
> ** building package indices ...
> * DONE (probdistr)
> * creating vignettes ... OK
> * removing junk files
> * checking for LF line-endings in source and make files
> * checking for empty or unneeded directories
> * building 'probdistr_1.00.tar.gz'

> Does someone have an idea about this?

Sure.  The QC tools have no idea about \SweaveInput, and think that each
.Rnw should have a \VignetteIndexEntry.

-k

> Thanks in advance

> Christophe

> PS : files are available on R-forge

> --
> Christophe Dutang
> Ph. D. student at ISFA, Lyon, France
> website: http://dutangc.free.fr

> ______________________________________________
> [hidden email] mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel

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